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Utilities
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B
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C
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D
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E
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F
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G
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H
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I
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J
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K
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L
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M
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N
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O
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P
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Q
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R
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S
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T
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U
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V
B
BaseDistance (class in netrd.distance)
,
[1]
BaseDynamics (class in netrd.dynamics)
,
[1]
BaseReconstructor (class in netrd.reconstruction)
,
[1]
BranchingModel (class in netrd.dynamics)
C
categorized_data() (in module netrd.utilities.entropy)
clusterGraph() (in module netrd.utilities.cluster)
CommunicabilityJSD (class in netrd.distance)
conditional_entropy() (in module netrd.utilities.entropy)
ConvergentCrossMapping (class in netrd.reconstruction)
CorrelationMatrix (class in netrd.reconstruction)
CorrelationSpanningTree (class in netrd.reconstruction)
create_graph() (in module netrd.utilities.graph)
D
DegreeDivergence (class in netrd.distance)
DeltaCon (class in netrd.distance)
dist() (netrd.distance.BaseDistance method)
(netrd.distance.CommunicabilityJSD method)
(netrd.distance.DMeasure method)
(netrd.distance.DegreeDivergence method)
(netrd.distance.DeltaCon method)
(netrd.distance.DistributionalNBD method)
(netrd.distance.Frobenius method)
(netrd.distance.GraphDiffusion method)
(netrd.distance.Hamming method)
(netrd.distance.HammingIpsenMikhailov method)
(netrd.distance.IpsenMikhailov method)
(netrd.distance.JaccardDistance method)
(netrd.distance.LaplacianSpectral method)
(netrd.distance.NetLSD method)
(netrd.distance.NetSimile method)
(netrd.distance.NonBacktrackingSpectral method)
(netrd.distance.OnionDivergence method)
(netrd.distance.PolynomialDissimilarity method)
(netrd.distance.PortraitDivergence method)
(netrd.distance.QuantumJSD method)
(netrd.distance.ResistancePerturbation method)
(netrd.distance.dkSeries method)
DistributionalNBD (class in netrd.distance)
dkSeries (class in netrd.distance)
DMeasure (class in netrd.distance)
E
ensure_undirected() (in module netrd.utilities.graph)
ensure_unweighted() (in module netrd.utilities.graph)
entropy_from_seq() (in module netrd.utilities.entropy)
F
fit() (netrd.reconstruction.BaseReconstructor method)
(netrd.reconstruction.ConvergentCrossMapping method)
(netrd.reconstruction.CorrelationMatrix method)
(netrd.reconstruction.CorrelationSpanningTree method)
(netrd.reconstruction.FreeEnergyMinimization method)
(netrd.reconstruction.GrangerCausality method)
(netrd.reconstruction.GraphicalLasso method)
(netrd.reconstruction.MarchenkoPastur method)
(netrd.reconstruction.MaximumLikelihoodEstimation method)
(netrd.reconstruction.MeanField method)
(netrd.reconstruction.MutualInformationMatrix method)
(netrd.reconstruction.NaiveTransferEntropy method)
(netrd.reconstruction.OUInference method)
(netrd.reconstruction.OptimalCausationEntropy method)
(netrd.reconstruction.PartialCorrelationInfluence method)
(netrd.reconstruction.PartialCorrelationMatrix method)
(netrd.reconstruction.RandomReconstructor method)
(netrd.reconstruction.ThoulessAndersonPalmer method)
FreeEnergyMinimization (class in netrd.reconstruction)
Frobenius (class in netrd.distance)
G
GrangerCausality (class in netrd.reconstruction)
GraphDiffusion (class in netrd.distance)
GraphicalLasso (class in netrd.reconstruction)
H
Hamming (class in netrd.distance)
HammingIpsenMikhailov (class in netrd.distance)
I
IpsenMikhailov (class in netrd.distance)
IsingGlauber (class in netrd.dynamics)
J
JaccardDistance (class in netrd.distance)
joint_entropy() (in module netrd.utilities.entropy)
js_divergence() (in module netrd.utilities.entropy)
K
Kuramoto (class in netrd.dynamics)
L
LaplacianSpectral (class in netrd.distance)
linear_bins() (in module netrd.utilities.entropy)
LotkaVolterra (class in netrd.dynamics)
M
MarchenkoPastur (class in netrd.reconstruction)
MaximumLikelihoodEstimation (class in netrd.reconstruction)
mean_GNP_distance() (in module netrd.utilities.standardize)
MeanField (class in netrd.reconstruction)
MutualInformationMatrix (class in netrd.reconstruction)
N
NaiveTransferEntropy (class in netrd.reconstruction)
NetLSD (class in netrd.distance)
netrd.distance (module)
netrd.dynamics (module)
netrd.reconstruction (module)
netrd.utilities.cluster (module)
netrd.utilities.entropy (module)
netrd.utilities.graph (module)
netrd.utilities.read (module)
netrd.utilities.standardize (module)
netrd.utilities.threshold (module)
NetSimile (class in netrd.distance)
NonBacktrackingSpectral (class in netrd.distance)
O
OnionDivergence (class in netrd.distance)
OptimalCausationEntropy (class in netrd.reconstruction)
OUInference (class in netrd.reconstruction)
P
PartialCorrelationInfluence (class in netrd.reconstruction)
PartialCorrelationMatrix (class in netrd.reconstruction)
PolynomialDissimilarity (class in netrd.distance)
PortraitDivergence (class in netrd.distance)
Q
QuantumJSD (class in netrd.distance)
R
RandomReconstructor (class in netrd.reconstruction)
read_time_series() (in module netrd.utilities.read)
ResistancePerturbation (class in netrd.distance)
S
SherringtonKirkpatrickIsing (class in netrd.dynamics)
simulate() (netrd.dynamics.BaseDynamics method)
(netrd.dynamics.BranchingModel method)
(netrd.dynamics.IsingGlauber method)
(netrd.dynamics.Kuramoto method)
(netrd.dynamics.LotkaVolterra method)
(netrd.dynamics.SISModel method)
(netrd.dynamics.SherringtonKirkpatrickIsing method)
(netrd.dynamics.SingleUnbiasedRandomWalker method)
(netrd.dynamics.VoterModel method)
SingleUnbiasedRandomWalker (class in netrd.dynamics)
SISModel (class in netrd.dynamics)
split_data() (netrd.reconstruction.GrangerCausality static method)
T
ThoulessAndersonPalmer (class in netrd.reconstruction)
threshold() (in module netrd.utilities.threshold)
threshold_in_range() (in module netrd.utilities.threshold)
threshold_on_degree() (in module netrd.utilities.threshold)
threshold_on_quantile() (in module netrd.utilities.threshold)
U
undirected() (in module netrd.utilities.graph)
unweighted() (in module netrd.utilities.graph)
V
VECTOR_DISTANCES (netrd.distance.DistributionalNBD attribute)
VoterModel (class in netrd.dynamics)
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